J3_7ZJW_020
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAUUC*GGACCAGAG*CAUU(PSU)G
- Length
- 20 nucleotides
- Bulged bases
- 7ZJW|1|S2|G|992
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJW|1|S2|C|938
7ZJW|1|S2|A|939
7ZJW|1|S2|U|940
7ZJW|1|S2|U|941
7ZJW|1|S2|C|942
*
7ZJW|1|S2|G|986
7ZJW|1|S2|G|987
7ZJW|1|S2|A|988
7ZJW|1|S2|C|989
7ZJW|1|S2|C|990
7ZJW|1|S2|A|991
7ZJW|1|S2|G|992
7ZJW|1|S2|A|993
7ZJW|1|S2|G|994
*
7ZJW|1|S2|C|1001
7ZJW|1|S2|A|1002
7ZJW|1|S2|U|1003
7ZJW|1|S2|U|1004
7ZJW|1|S2|PSU|1005
7ZJW|1|S2|G|1006
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Lr
- 60S ribosomal protein eL43
- Chain SF
- Ribosomal protein eS26
- Chain SM
- 40S ribosomal protein S3a
- Chain SY
- 40S ribosomal protein uS15
- Chain SZ
- 40S ribosomal protein uS11
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