J3_7ZJW_028
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- U(OMC)UGGC*GGACAAG*CCCGAGAUUGA
- Length
- 24 nucleotides
- Bulged bases
- 7ZJW|1|S2|U|1478
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJW|1|S2|U|1391
7ZJW|1|S2|OMC|1392
7ZJW|1|S2|U|1393
7ZJW|1|S2|G|1394
7ZJW|1|S2|G|1395
7ZJW|1|S2|C|1396
*
7ZJW|1|S2|G|1451
7ZJW|1|S2|G|1452
7ZJW|1|S2|A|1453
7ZJW|1|S2|C|1454
7ZJW|1|S2|A|1455
7ZJW|1|S2|A|1456
7ZJW|1|S2|G|1457
*
7ZJW|1|S2|C|1471
7ZJW|1|S2|C|1472
7ZJW|1|S2|C|1473
7ZJW|1|S2|G|1474
7ZJW|1|S2|A|1475
7ZJW|1|S2|G|1476
7ZJW|1|S2|A|1477
7ZJW|1|S2|U|1478
7ZJW|1|S2|U|1479
7ZJW|1|S2|G|1480
7ZJW|1|S2|A|1481
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SG
- RACK1
- Chain SH
- 40S ribosomal protein uS14
- Chain SO
- 40S ribosomal protein S3
- Chain SQ
- Ribosomal protein S5
- Chain Sb
- 40S ribosomal protein uS9
- Chain Sc
- 40S ribosomal protein eS17
- Chain Sf
- 40S ribosomal protein uS10
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