J3_7ZJW_043
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAGAUCAAAACCAACC*GGCUUUG*CUAG
- Length
- 27 nucleotides
- Bulged bases
- 7ZJW|1|S2|A|235
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJW|1|S2|C|223
7ZJW|1|S2|A|224
7ZJW|1|S2|G|225
7ZJW|1|S2|A|226
7ZJW|1|S2|U|227
7ZJW|1|S2|C|228
7ZJW|1|S2|A|229
7ZJW|1|S2|A|230
7ZJW|1|S2|A|231
7ZJW|1|S2|A|232
7ZJW|1|S2|C|233
7ZJW|1|S2|C|234
7ZJW|1|S2|A|235
7ZJW|1|S2|A|236
7ZJW|1|S2|C|237
7ZJW|1|S2|C|238
*
7ZJW|1|S2|G|283
7ZJW|1|S2|G|284
7ZJW|1|S2|C|285
7ZJW|1|S2|U|286
7ZJW|1|S2|U|287
7ZJW|1|S2|U|288
7ZJW|1|S2|G|289
*
7ZJW|1|S2|C|296
7ZJW|1|S2|U|297
7ZJW|1|S2|A|298
7ZJW|1|S2|G|299
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SP
- 40S ribosomal protein eS4
- Chain SR
- 40S ribosomal protein S6
- Chain ST
- 40S ribosomal protein S8
- Chain SW
- 40S ribosomal protein S11
Coloring options: