J3_7ZJX_001

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

7ZJX|1|L5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|C|112
7ZJX|1|L5|A|113
7ZJX|1|L5|G|114
7ZJX|1|L5|C|115
7ZJX|1|L5|G|116
*
7ZJX|1|L5|C|155
7ZJX|1|L5|G|156
7ZJX|1|L5|U|157
7ZJX|1|L5|A|158
7ZJX|1|L5|C|159
7ZJX|1|L5|G|160
*
7ZJX|1|L5|C|275
7ZJX|1|L5|C|276
7ZJX|1|L5|G|277
7ZJX|1|L5|G|278

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein eL8

Chain LO

60S ribosomal protein eL13

Chain LQ

Ribosomal protein L15

Chain Lk

60S ribosomal protein L35

Chain Ll

60S ribosomal protein L36