J3_7ZJX_010

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

7ZJX|1|L5|U|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|A|2394
7ZJX|1|L5|G|2395
7ZJX|1|L5|A|2396
7ZJX|1|L5|U|2397
7ZJX|1|L5|G|2398
*
7ZJX|1|L5|C|2415
7ZJX|1|L5|A|2416
7ZJX|1|L5|G|2417
7ZJX|1|L5|U|2418
*
7ZJX|1|L5|A|2600
7ZJX|1|L5|G|2601
7ZJX|1|L5|G|2602
7ZJX|1|L5|G|2603
7ZJX|1|L5|U|2604
7ZJX|1|L5|G|2605
7ZJX|1|L5|U|2606
7ZJX|1|L5|A|2607
7ZJX|1|L5|A|2608
7ZJX|1|L5|A|2609
7ZJX|1|L5|U|2610

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lc

60S ribosomal protein L27