J3_7ZJX_022

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

7ZJX|1|S2|C|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|S2|C|1095
7ZJX|1|S2|U|1096
7ZJX|1|S2|G|1097
*
7ZJX|1|S2|U|1137
7ZJX|1|S2|U|1138
7ZJX|1|S2|C|1139
7ZJX|1|S2|C|1140
7ZJX|1|S2|G|1141
*
7ZJX|1|S2|C|1148
7ZJX|1|S2|A|1149
7ZJX|1|S2|A|1150
7ZJX|1|S2|A|1151
7ZJX|1|S2|G|1152

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S27

Chain SF

40S ribosomal protein eS26

Chain SL

40S ribosomal protein SA

Chain Sg

40S ribosomal protein eS21

Chain Sh

40S ribosomal protein S15a