J3_7ZPQ_021

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GAC*GCUAAGGAGUG*CUCACC

Length

20 nucleotides

Bulged bases

7ZPQ|1|5|A|1263

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZPQ|1|5|G|1230
7ZPQ|1|5|A|1231
7ZPQ|1|5|C|1232
*
7ZPQ|1|5|G|1256
7ZPQ|1|5|C|1257
7ZPQ|1|5|U|1258
7ZPQ|1|5|A|1259
7ZPQ|1|5|A|1260
7ZPQ|1|5|G|1261
7ZPQ|1|5|G|1262
7ZPQ|1|5|A|1263
7ZPQ|1|5|G|1264
7ZPQ|1|5|U|1265
7ZPQ|1|5|G|1266
*
7ZPQ|1|5|C|1275
7ZPQ|1|5|U|1276
7ZPQ|1|5|C|1277
7ZPQ|1|5|A|1278
7ZPQ|1|5|C|1279
7ZPQ|1|5|C|1280

Current chains

Chain 5

25S ribosomal RNA

Nearby chains