J3_7ZQ6_015

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CCAGGAUGUUGG*CCAUCAUUUAAAGAAA*UCACUGG

Length

35 nucleotides

Bulged bases

7ZQ6|1|b|C|1053, 7ZQ6|1|b|A|1057, 7ZQ6|1|b|G|1059, 7ZQ6|1|b|U|1061, 7ZQ6|1|b|A|1103

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZQ6|1|b|C|1052
7ZQ6|1|b|C|1053
7ZQ6|1|b|A|1054
7ZQ6|1|b|G|1055
7ZQ6|1|b|G|1056
7ZQ6|1|b|A|1057
7ZQ6|1|b|U|1058
7ZQ6|1|b|G|1059
7ZQ6|1|b|U|1060
7ZQ6|1|b|U|1061
7ZQ6|1|b|G|1062
7ZQ6|1|b|G|1063
*
7ZQ6|1|b|C|1075
7ZQ6|1|b|C|1076
7ZQ6|1|b|A|1077
7ZQ6|1|b|U|1078
7ZQ6|1|b|C|1079
7ZQ6|1|b|A|1080
7ZQ6|1|b|U|1081
7ZQ6|1|b|U|1082
7ZQ6|1|b|U|1083
7ZQ6|1|b|A|1084
7ZQ6|1|b|A|1085
7ZQ6|1|b|A|1086
7ZQ6|1|b|G|1087
7ZQ6|1|b|A|1088
7ZQ6|1|b|A|1089
7ZQ6|1|b|A|1090
*
7ZQ6|1|b|U|1101
7ZQ6|1|b|C|1102
7ZQ6|1|b|A|1103
7ZQ6|1|b|C|1104
7ZQ6|1|b|U|1105
7ZQ6|1|b|G|1106
7ZQ6|1|b|G|1107

Current chains

Chain b

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36