J3_7ZRS_019
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- AUAG*CGUAG*UCGAAU
- Length
- 15 nucleotides
- Bulged bases
- 7ZRS|1|5|A|897
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_019 not in the Motif Atlas
- Homologous match to J3_5TBW_005
- Geometric discrepancy: 0.0913
- The information below is about J3_5TBW_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_33851.1
- Basepair signature
- cWW-tSH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7ZRS|1|5|A|829
7ZRS|1|5|U|830
7ZRS|1|5|A|831
7ZRS|1|5|G|832
*
7ZRS|1|5|C|864
7ZRS|1|5|G|865
7ZRS|1|5|U|866
7ZRS|1|5|A|867
7ZRS|1|5|G|868
*
7ZRS|1|5|U|893
7ZRS|1|5|C|894
7ZRS|1|5|G|895
7ZRS|1|5|A|896
7ZRS|1|5|A|897
7ZRS|1|5|U|898
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein L2-A
- Chain BQ
- 60S ribosomal protein L19-A
- Chain Bf
- 60S ribosomal protein L34-A
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