J3_7ZRS_026
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_026 not in the Motif Atlas
- Homologous match to J3_8C3A_008
- Geometric discrepancy: 0.0624
- The information below is about J3_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_18654.1
- Basepair signature
- cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ZRS|1|5|A|2433
7ZRS|1|5|U|2434
7ZRS|1|5|U|2435
7ZRS|1|5|G|2436
*
7ZRS|1|5|C|2513
7ZRS|1|5|U|2514
7ZRS|1|5|U|2515
7ZRS|1|5|A|2516
7ZRS|1|5|U|2517
7ZRS|1|5|U|2518
*
7ZRS|1|5|A|2591
7ZRS|1|5|A|2592
7ZRS|1|5|G|2593
7ZRS|1|5|A|2594
7ZRS|1|5|C|2595
7ZRS|1|5|A|2596
7ZRS|1|5|U|2597
7ZRS|1|5|U|2598
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein L2-A
- Chain BG
- 60S ribosomal protein L8-A
- Chain BM
- 60S ribosomal protein L15-A
- Chain Bh
- 60S ribosomal protein L36-A
Coloring options: