J3_7ZRS_042
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- AGACG*CC*GAAAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_042 not in the Motif Atlas
- Homologous match to J3_8P9A_058
- Geometric discrepancy: 0.0707
- The information below is about J3_8P9A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08594.1
- Basepair signature
- cWW-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
7ZRS|1|5|A|1655
7ZRS|1|5|G|1656
7ZRS|1|5|A|1657
7ZRS|1|5|C|1658
7ZRS|1|5|G|1659
*
7ZRS|1|5|C|1792
7ZRS|1|5|C|1793
*
7ZRS|1|5|G|1797
7ZRS|1|5|A|1798
7ZRS|1|5|A|1799
7ZRS|1|5|A|1800
7ZRS|1|5|A|1801
7ZRS|1|5|U|1802
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein L2-A
- Chain Bf
- 60S ribosomal protein L34-A
- Chain Bo
- 60S ribosomal protein L43-A
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