J3_7ZRS_043
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GUC*GCCUAUCGAUCC*GGUGCC
- Length
- 21 nucleotides
- Bulged bases
- 7ZRS|1|5|C|2761, 7ZRS|1|5|C|2798
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_043 not in the Motif Atlas
- Homologous match to J3_8C3A_056
- Geometric discrepancy: 0.0575
- The information below is about J3_8C3A_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_27903.1
- Basepair signature
- cWW-F-F-F-cWW-F-F-F-F-tHW-tHW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7ZRS|1|5|G|2652
7ZRS|1|5|U|2653
7ZRS|1|5|C|2654
*
7ZRS|1|5|G|2755
7ZRS|1|5|C|2756
7ZRS|1|5|C|2757
7ZRS|1|5|U|2758
7ZRS|1|5|A|2759
7ZRS|1|5|U|2760
7ZRS|1|5|C|2761
7ZRS|1|5|G|2762
7ZRS|1|5|A|2763
7ZRS|1|5|U|2764
7ZRS|1|5|C|2765
7ZRS|1|5|C|2766
*
7ZRS|1|5|G|2794
7ZRS|1|5|G|2795
7ZRS|1|5|U|2796
7ZRS|1|5|G|2797
7ZRS|1|5|C|2798
7ZRS|1|5|C|2799
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain BP
- 60S ribosomal protein L18-A
- Chain BS
- 60S ribosomal protein L21-A
- Chain BZ
- 60S ribosomal protein L28
- Chain Bn
- 60S ribosomal protein L42-A
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