J3_7ZTA_016

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

7ZTA|1|23S1|U|686, 7ZTA|1|23S1|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_016 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0484

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7ZTA|1|23S1|U|683
7ZTA|1|23S1|G|684
7ZTA|1|23S1|A|685
7ZTA|1|23S1|U|686
7ZTA|1|23S1|C|687
7ZTA|1|23S1|U|688
7ZTA|1|23S1|A|689
*
7ZTA|1|23S1|U|773
7ZTA|1|23S1|G|774
7ZTA|1|23S1|G|775
*
7ZTA|1|23S1|C|791
7ZTA|1|23S1|A|792
7ZTA|1|23S1|A|793
7ZTA|1|23S1|A|794

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L021

50S ribosomal protein L2

Chain L341

50S ribosomal protein L34