J3_7ZTA_017

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_017 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0467

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7ZTA|1|23S1|C|698
7ZTA|1|23S1|A|699
7ZTA|1|23S1|G|700
*
7ZTA|1|23S1|C|732
7ZTA|1|23S1|G|733
7ZTA|1|23S1|A|734
7ZTA|1|23S1|A|735
7ZTA|1|23S1|C|736
*
7ZTA|1|23S1|G|760
7ZTA|1|23S1|A|761
7ZTA|1|23S1|U|762
7ZTA|1|23S1|G|763

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L021

50S ribosomal protein L2