J3_7ZTA_024

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

7ZTA|1|23S1|A|2518, 7ZTA|1|23S1|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_024 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.0848

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7ZTA|1|23S1|C|2517
7ZTA|1|23S1|A|2518
7ZTA|1|23S1|U|2519
7ZTA|1|23S1|C|2520
*
7ZTA|1|23S1|G|2545
7ZTA|1|23S1|U|2546
7ZTA|1|23S1|A|2547
*
7ZTA|1|23S1|U|2561
7ZTA|1|23S1|U|2562
7ZTA|1|23S1|U|2563
7ZTA|1|23S1|A|2564
7ZTA|1|23S1|A|2565
7ZTA|1|23S1|A|2566
7ZTA|1|23S1|G|2567

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L031

50S ribosomal protein L3

Chain L141

50S ribosomal protein L14