J3_7ZTA_030

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7ZTA|1|16S1|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_030 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1314

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7ZTA|1|16S1|C|990
7ZTA|1|16S1|U|991
7ZTA|1|16S1|U|992
7ZTA|1|16S1|G|993
7ZTA|1|16S1|A|994
7ZTA|1|16S1|C|995
7ZTA|1|16S1|A|996
7ZTA|1|16S1|U|997
*
7ZTA|1|16S1|A|1044
7ZTA|1|16S1|C|1045
7ZTA|1|16S1|A|1046
7ZTA|1|16S1|G|1047
*
7ZTA|1|16S1|C|1210
7ZTA|1|16S1|U|1211
7ZTA|1|16S1|U|1212
7ZTA|1|16S1|A|1213
7ZTA|1|16S1|C|1214
7ZTA|1|16S1|G|1215

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S141

30S ribosomal protein S14