J3_7ZTA_035

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7ZTA|1|23S1|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_035 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0597

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7ZTA|1|23S1|G|297
7ZTA|1|23S1|G|298
7ZTA|1|23S1|A|299
7ZTA|1|23S1|A|300
7ZTA|1|23S1|G|301
*
7ZTA|1|23S1|C|316
7ZTA|1|23S1|G|317
7ZTA|1|23S1|C|318
7ZTA|1|23S1|G|319
7ZTA|1|23S1|A|320
7ZTA|1|23S1|U|321
7ZTA|1|23S1|A|322
7ZTA|1|23S1|C|323
7ZTA|1|23S1|A|324
7ZTA|1|23S1|G|325
*
7ZTA|1|23S1|C|337
7ZTA|1|23S1|G|338
7ZTA|1|23S1|U|339
7ZTA|1|23S1|A|340
7ZTA|1|23S1|C|341

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L041

50S ribosomal protein L4

Chain L241

50S ribosomal protein L24