3D structure

PDB id
7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
UAAC*GGACUA*UGGAAGUUUG
Length
20 nucleotides
Bulged bases
7ZUW|1|2|U|1413, 7ZUW|1|2|U|1414
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZUW|1|2|U|1335
7ZUW|1|2|A|1336
7ZUW|1|2|A|1337
7ZUW|1|2|C|1338
*
7ZUW|1|2|G|1386
7ZUW|1|2|G|1387
7ZUW|1|2|A|1388
7ZUW|1|2|C|1389
7ZUW|1|2|U|1390
7ZUW|1|2|A|1391
*
7ZUW|1|2|U|1407
7ZUW|1|2|G|1408
7ZUW|1|2|G|1409
7ZUW|1|2|A|1410
7ZUW|1|2|A|1411
7ZUW|1|2|G|1412
7ZUW|1|2|U|1413
7ZUW|1|2|U|1414
7ZUW|1|2|U|1415
7ZUW|1|2|G|1416

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain AF
Rps5p
Chain AQ
40S ribosomal protein S16-A
Chain AR
40S ribosomal protein S17-A
Chain AU
RPS20 isoform 1
Chain Ad
RPS29A isoform 1
Chain Ag
Guanine nucleotide-binding protein subunit beta-like protein

Coloring options:

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