J3_7ZUW_038

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CACUGA*UCGUGCUGG*CGAG

Length

19 nucleotides

Bulged bases

7ZUW|1|2|U|1473, 7ZUW|1|2|G|1539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZUW|1|2|C|1470
7ZUW|1|2|A|1471
7ZUW|1|2|C|1472
7ZUW|1|2|U|1473
7ZUW|1|2|G|1474
7ZUW|1|2|A|1475
*
7ZUW|1|2|U|1532
7ZUW|1|2|C|1533
7ZUW|1|2|G|1534
7ZUW|1|2|U|1535
7ZUW|1|2|G|1536
7ZUW|1|2|C|1537
7ZUW|1|2|U|1538
7ZUW|1|2|G|1539
7ZUW|1|2|G|1540
*
7ZUW|1|2|C|1571
7ZUW|1|2|G|1572
7ZUW|1|2|A|1573
7ZUW|1|2|G|1574

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AF

Rps5p

Chain AS

40S ribosomal protein S18-A

Chain AT

40S ribosomal protein S19-A

Chain AZ

40S ribosomal protein S25