J3_7ZUX_010
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZUX_010 not in the Motif Atlas
- Homologous match to J3_4V88_039
- Geometric discrepancy: 0.2173
- The information below is about J3_4V88_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47248.1
- Basepair signature
- cWW-F-F-F-F-F-tHH-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7ZUX|1|2|U|1283
7ZUX|1|2|C|1284
7ZUX|1|2|U|1285
7ZUX|1|2|U|1286
7ZUX|1|2|A|1287
7ZUX|1|2|G|1288
*
7ZUX|1|2|C|1327
7ZUX|1|2|G|1328
7ZUX|1|2|A|1329
7ZUX|1|2|G|1330
7ZUX|1|2|A|1331
7ZUX|1|2|C|1332
*
7ZUX|1|2|G|1419
7ZUX|1|2|C|1420
7ZUX|1|2|A|1421
7ZUX|1|2|A|1422
7ZUX|1|2|U|1423
7ZUX|1|2|A|1424
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain DC
- 40S ribosomal protein S2
- Chain DD
- 40S ribosomal protein S3
- Chain DQ
- 40S ribosomal protein S16-A
- Chain DR
- 40S ribosomal protein S17-A
- Chain DU
- 40S ribosomal protein S20
- Chain Dd
- 40S ribosomal protein S29-A
Coloring options: