J3_7ZUX_011

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UG*UGUC*GAUAA

Length

11 nucleotides

Bulged bases

7ZUX|1|2|A|1321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZUX_011 not in the Motif Atlas

Homologous match to J3_8C3A_085

Geometric discrepancy: 0.4673

The information below is about J3_8C3A_085

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.2

Basepair signature

cWW-F-F-F-F-tSS-cWW-cWW

Number of instances in this motif group

3

Unit IDs

7ZUX|1|2|U|1293
7ZUX|1|2|G|1294
*
7ZUX|1|2|U|1303
7ZUX|1|2|G|1304
7ZUX|1|2|U|1305
7ZUX|1|2|C|1306
*
7ZUX|1|2|G|1318
7ZUX|1|2|A|1319
7ZUX|1|2|U|1320
7ZUX|1|2|A|1321
7ZUX|1|2|A|1322

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain DA

40S ribosomal protein S0-A

Chain DC

40S ribosomal protein S2

Chain DR

40S ribosomal protein S17-A