J3_7ZUX_017
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UC*GAGGACUGCG*CAAGGA
- Length
- 18 nucleotides
- Bulged bases
- 7ZUX|1|5|A|608
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZUX_017 not in the Motif Atlas
- Homologous match to J3_5TBW_003
- Geometric discrepancy: 0.0987
- The information below is about J3_5TBW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_15033.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-F-cWS-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7ZUX|1|5|U|503
7ZUX|1|5|C|504
*
7ZUX|1|5|G|589
7ZUX|1|5|A|590
7ZUX|1|5|G|591
7ZUX|1|5|G|592
7ZUX|1|5|A|593
7ZUX|1|5|C|594
7ZUX|1|5|U|595
7ZUX|1|5|G|596
7ZUX|1|5|C|597
7ZUX|1|5|G|598
*
7ZUX|1|5|C|607
7ZUX|1|5|A|608
7ZUX|1|5|A|609
7ZUX|1|5|G|610
7ZUX|1|5|G|611
7ZUX|1|5|A|612
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain EC
- 60S ribosomal protein L4-A
- Chain EE
- 60S ribosomal protein L6-B
- Chain EF
- 60S ribosomal protein L7-A
- Chain Ed
- 60S ribosomal protein L32
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