3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
AUAG*CGUAG*UCGAAU
Length
15 nucleotides
Bulged bases
7ZUX|1|5|A|897
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7ZUX_019 not in the Motif Atlas
Homologous match to J3_5TBW_005
Geometric discrepancy: 0.0999
The information below is about J3_5TBW_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_33851.1
Basepair signature
cWW-tSH-F-F-tHS-cWW-cWW-F-F
Number of instances in this motif group
1

Unit IDs

7ZUX|1|5|A|829
7ZUX|1|5|U|830
7ZUX|1|5|A|831
7ZUX|1|5|G|832
*
7ZUX|1|5|C|864
7ZUX|1|5|G|865
7ZUX|1|5|U|866
7ZUX|1|5|A|867
7ZUX|1|5|G|868
*
7ZUX|1|5|U|893
7ZUX|1|5|C|894
7ZUX|1|5|G|895
7ZUX|1|5|A|896
7ZUX|1|5|A|897
7ZUX|1|5|U|898

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EA
60S ribosomal protein L2-A
Chain EQ
60S ribosomal protein L19-A
Chain Ef
60S ribosomal protein L34-A

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1621 s