J3_7ZW0_018

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUAG*CGUAG*UCGAAU

Length

15 nucleotides

Bulged bases

7ZW0|1|LA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZW0_018 not in the Motif Atlas

Homologous match to J3_8P9A_050

Geometric discrepancy: 0.0906

The information below is about J3_8P9A_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_21998.1

Basepair signature

cWW-tSH-F-F-tHS-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

7ZW0|1|LA|A|828
7ZW0|1|LA|U|829
7ZW0|1|LA|A|830
7ZW0|1|LA|G|831
*
7ZW0|1|LA|C|863
7ZW0|1|LA|G|864
7ZW0|1|LA|U|865
7ZW0|1|LA|A|866
7ZW0|1|LA|G|867
*
7ZW0|1|LA|U|892
7ZW0|1|LA|C|893
7ZW0|1|LA|G|894
7ZW0|1|LA|A|895
7ZW0|1|LA|A|896
7ZW0|1|LA|U|897

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE

60S ribosomal protein L2-A

Chain LU

60S ribosomal protein L19-A

Chain Lj

60S ribosomal protein L34-A