J3_8P9A_050
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUAG*CGUAG*UCGAAU
- Length
- 15 nucleotides
- Bulged bases
- 8P9A|1|AR|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_21998.1
- Basepair signature
- cWW-tSH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
8P9A|1|AR|A|828
8P9A|1|AR|U|829
8P9A|1|AR|A|830
8P9A|1|AR|G|831
*
8P9A|1|AR|C|863
8P9A|1|AR|G|864
8P9A|1|AR|U|865
8P9A|1|AR|A|866
8P9A|1|AR|G|867
*
8P9A|1|AR|U|892
8P9A|1|AR|C|893
8P9A|1|AR|G|894
8P9A|1|AR|A|895
8P9A|1|AR|A|896
8P9A|1|AR|U|897
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CD
- 60S ribosomal protein L2-A
- Chain CT
- 60S ribosomal protein L19-A
- Chain DI
- 60S ribosomal protein L34-A
- Chain DR
- 60S ribosomal protein L43-A
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