J3_8A3D_026
3D structure
- PDB id
- 8A3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- GUUG*CCUUC*GCACCGCACGUUC
- Length
- 22 nucleotides
- Bulged bases
- 8A3D|1|A|U|4882, 8A3D|1|A|A|4938, 8A3D|1|A|C|4940, 8A3D|1|A|A|4943, 8A3D|1|A|C|4944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8A3D|1|A|G|4751
8A3D|1|A|U|4752
8A3D|1|A|U|4753
8A3D|1|A|G|4754
*
8A3D|1|A|C|4879
8A3D|1|A|C|4880
8A3D|1|A|U|4881
8A3D|1|A|U|4882
8A3D|1|A|C|4883
*
8A3D|1|A|G|4936
8A3D|1|A|C|4937
8A3D|1|A|A|4938
8A3D|1|A|C|4939
8A3D|1|A|C|4940
8A3D|1|A|G|4941
8A3D|1|A|C|4942
8A3D|1|A|A|4943
8A3D|1|A|C|4944
8A3D|1|A|G|4945
8A3D|1|A|U|4946
8A3D|1|A|U|4947
8A3D|1|A|C|4948
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L6
- Chain I
- 60S ribosomal protein L13a
- Chain Z
- 60S ribosomal protein L35a
- Chain s
- 60S ribosomal protein L14
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