J3_8B0X_006

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44359.1

Basepair signature

cWW-tSH-cWW-F-cWW-cWW

Number of instances in this motif group

5

Unit IDs

8B0X|1|A|U|943
8B0X|1|A|G|944
8B0X|1|A|G|945
8B0X|1|A|A|946
*
8B0X|1|A|U|1235
8B0X|1|A|A|1236
8B0X|1|A|C|1237
*
8B0X|1|A|G|1337
8B0X|1|A|G|1338
8B0X|1|A|A|1339
8B0X|1|A|A|1340

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain M

30S ribosomal protein S13

Chain Z

Transfer RNA; tRNA