J3_8B0X_022
3D structure
- PDB id
- 8B0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 70S ribosome in the unrotated state (P and E, tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- CUA*UAG*CAUAAG
- Length
- 12 nucleotides
- Bulged bases
- 8B0X|1|a|U|2338
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8B0X_022 not in the Motif Atlas
- Homologous match to J3_5J7L_045
- Geometric discrepancy: 0.1388
- The information below is about J3_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_61124.2
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
8B0X|1|a|C|2299
8B0X|1|a|U|2300
8B0X|1|a|A|2301
*
8B0X|1|a|U|2325
8B0X|1|a|A|2326
8B0X|1|a|G|2327
*
8B0X|1|a|C|2336
8B0X|1|a|A|2337
8B0X|1|a|U|2338
8B0X|1|a|A|2339
8B0X|1|a|A|2340
8B0X|1|a|G|2341
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain Z
- Transfer RNA; tRNA
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain f
- 50S ribosomal protein L5
- Chain n
- 50S ribosomal protein L18
- Chain v
- 50S ribosomal protein L27
Coloring options: