J3_8B0X_024

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

CUG*CC*GAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8B0X_024 not in the Motif Atlas

Homologous match to J3_5J7L_047

Geometric discrepancy: 0.1445

The information below is about J3_5J7L_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_30104.1

Basepair signature

cWW-F-F-cWW-cWW

Number of instances in this motif group

1

Unit IDs

8B0X|1|a|C|2793
8B0X|1|a|U|2794
8B0X|1|a|G|2795
*
8B0X|1|a|C|2809
8B0X|1|a|C|2810
*
8B0X|1|a|G|2896
8B0X|1|a|A|2897
8B0X|1|a|G|2898

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3