J3_8B2L_008
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUC*GAUAG*CGUAC
- Length
- 13 nucleotides
- Bulged bases
- 8B2L|1|A3|A|1568, 8B2L|1|A3|U|1585
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B2L|1|A3|G|1549
8B2L|1|A3|U|1550
8B2L|1|A3|C|1551
*
8B2L|1|A3|G|1567
8B2L|1|A3|A|1568
8B2L|1|A3|U|1569
8B2L|1|A3|A|1570
8B2L|1|A3|G|1571
*
8B2L|1|A3|C|1583
8B2L|1|A3|G|1584
8B2L|1|A3|U|1585
8B2L|1|A3|A|1586
8B2L|1|A3|C|1587
Current chains
- Chain A3
- 25S rRNA
Nearby chains
- Chain B3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain F3
- Ribosomal protein L15
- Chain V3
- Ribosomal protein L37
- Chain c3
- 60S ribosomal protein L7a
- Chain k3
- 60S ribosomal protein L23a
- Chain o3
- uL2 (60S ribosomal protein L8)
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