J3_8B2L_013

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCU*AAAUA*UCCG

Length

12 nucleotides

Bulged bases

8B2L|1|A3|A|3308, 8B2L|1|A3|C|3382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|C|3290
8B2L|1|A3|C|3291
8B2L|1|A3|U|3292
*
8B2L|1|A3|A|3306
8B2L|1|A3|A|3307
8B2L|1|A3|A|3308
8B2L|1|A3|U|3309
8B2L|1|A3|A|3310
*
8B2L|1|A3|U|3381
8B2L|1|A3|C|3382
8B2L|1|A3|C|3383
8B2L|1|A3|G|3384

Current chains

Chain A3

25S rRNA

Nearby chains

Chain j3

50S ribosomal protein L22, chloroplastic

Chain r3

uL3 (60S ribosomal protein L3)