J3_8B2L_042
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGGA*UUAACA*UA
- Length
- 12 nucleotides
- Bulged bases
- 8B2L|1|h1|C|867
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8B2L|1|h1|U|636
8B2L|1|h1|G|637
8B2L|1|h1|G|638
8B2L|1|h1|A|639
*
8B2L|1|h1|U|863
8B2L|1|h1|U|864
8B2L|1|h1|A|865
8B2L|1|h1|A|866
8B2L|1|h1|C|867
8B2L|1|h1|A|868
*
8B2L|1|h1|U|968
8B2L|1|h1|A|969
Current chains
- Chain h1
- 18S rRNA
Nearby chains
- Chain K1
- 40S ribosomal protein S27
- Chain O1
- 40S ribosomal protein S7
- Chain T1
- 40S ribosomal protein S23
- Chain W1
- 30S ribosomal protein S15, chloroplastic
- Chain X1
- 40S ribosomal protein S11-like
- Chain e1
- 40S ribosomal protein S15a-1
Coloring options: