J3_8BH6_013

3D structure

PDB id

8BH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 30S ribosomal subunit from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGG*CUUGAGUGC*GUAACUGACG

Length

22 nucleotides

Bulged bases

8BH6|1|a|U|661, 8BH6|1|a|U|759

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH6|1|a|C|594
8BH6|1|a|G|595
8BH6|1|a|G|596
*
8BH6|1|a|C|659
8BH6|1|a|U|660
8BH6|1|a|U|661
8BH6|1|a|G|662
8BH6|1|a|A|663
8BH6|1|a|G|664
8BH6|1|a|U|665
8BH6|1|a|G|666
8BH6|1|a|C|667
*
8BH6|1|a|G|754
8BH6|1|a|U|755
8BH6|1|a|A|756
8BH6|1|a|A|757
8BH6|1|a|C|758
8BH6|1|a|U|759
8BH6|1|a|G|760
8BH6|1|a|A|761
8BH6|1|a|C|762
8BH6|1|a|G|763

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain h

30S ribosomal protein S8

Chain l

30S ribosomal protein S12

Chain o

30S ribosomal protein S15

Chain q

30S ribosomal protein S17