J3_8BH6_018
3D structure
- PDB id
- 8BH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mature 30S ribosomal subunit from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UAA*UGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 8BH6|1|a|U|1194
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BH6_018 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.2118
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8BH6|1|a|U|1128
8BH6|1|a|A|1129
8BH6|1|a|A|1130
*
8BH6|1|a|U|1166
8BH6|1|a|G|1167
8BH6|1|a|A|1168
8BH6|1|a|C|1169
8BH6|1|a|U|1170
8BH6|1|a|G|1171
8BH6|1|a|C|1172
*
8BH6|1|a|G|1186
8BH6|1|a|A|1187
8BH6|1|a|G|1188
8BH6|1|a|G|1189
8BH6|1|a|A|1190
8BH6|1|a|A|1191
8BH6|1|a|G|1192
8BH6|1|a|G|1193
8BH6|1|a|U|1194
8BH6|1|a|G|1195
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: