3D structure

PDB id
8BH7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
Experimental method
ELECTRON MICROSCOPY
Resolution
4.23 Å

Loop

Sequence
GGUUUAAUUC*GAAGAACCUUAC*GGCUACAC
Length
30 nucleotides
Bulged bases
8BH7|1|a|A|985, 8BH7|1|a|G|986, 8BH7|1|a|A|988
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8BH7|1|a|G|963
8BH7|1|a|G|964
8BH7|1|a|U|965
8BH7|1|a|U|966
8BH7|1|a|U|967
8BH7|1|a|A|968
8BH7|1|a|A|969
8BH7|1|a|U|970
8BH7|1|a|U|971
8BH7|1|a|C|972
*
8BH7|1|a|G|983
8BH7|1|a|A|984
8BH7|1|a|A|985
8BH7|1|a|G|986
8BH7|1|a|A|987
8BH7|1|a|A|988
8BH7|1|a|C|989
8BH7|1|a|C|990
8BH7|1|a|U|991
8BH7|1|a|U|992
8BH7|1|a|A|993
8BH7|1|a|C|994
*
8BH7|1|a|G|1232
8BH7|1|a|G|1233
8BH7|1|a|C|1234
8BH7|1|a|U|1235
8BH7|1|a|A|1236
8BH7|1|a|C|1237
8BH7|1|a|A|1238
8BH7|1|a|C|1239

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain j
30S ribosomal protein S10
Chain m
30S ribosomal protein S13
Chain n
30S ribosomal protein S14 type Z
Chain s
30S ribosomal protein S19

Coloring options:

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