8BH7 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8BH7_001 | No text annotation | ||
| HL_8BH7_033 | No text annotation | ||
| HL_8BH7_002 | No text annotation | ||
| HL_8BH7_003 | GNRA | ||
| HL_8BH7_004 | No text annotation | ||
| HL_8BH7_005 | No text annotation | ||
| HL_8BH7_036 | No text annotation | ||
| HL_8BH7_006 | GNRA related | ||
| HL_8BH7_007 | GNRA | ||
| HL_8BH7_008 | No text annotation | ||
| HL_8BH7_034 | No text annotation | ||
| HL_8BH7_009 | UNCG | ||
| HL_8BH7_010 | GNRA | ||
| HL_8BH7_011 | UNCG | ||
| HL_8BH7_012 | No text annotation | ||
| HL_8BH7_013 | Mini UNCG | ||
| HL_8BH7_035 | tRNA anticodon loop | ||
| HL_8BH7_014 | GNRA-like with tWH | ||
| HL_8BH7_015 | No text annotation | ||
| HL_8BH7_016 | GNRA | ||
| HL_8BH7_017 | No text annotation | ||
| HL_8BH7_018 | No text annotation | ||
| HL_8BH7_019 | GNRA | ||
| HL_8BH7_020 | GNRA | ||
| HL_8BH7_021 | No text annotation | ||
| HL_8BH7_022 | GNRA | ||
| HL_8BH7_023 | No text annotation | ||
| HL_8BH7_024 | GNRA with extra cWW | ||
| HL_8BH7_025 | No text annotation | ||
| HL_8BH7_026 | No text annotation | ||
| HL_8BH7_027 | GNRA | ||
| HL_8BH7_028 | Mini UNCG | ||
| HL_8BH7_029 | T-loop with 3 stacked bulged bases | ||
| HL_8BH7_030 | No text annotation | ||
| HL_8BH7_031 | Mini UNCG | ||
| HL_8BH7_032 | GNRA |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8BH7_001 | Single bulged G | ||
| IL_8BH7_002 | Single bulged A | ||
| IL_8BH7_003 | No text annotation | ||
| IL_8BH7_004 | Minor groove platform | ||
| IL_8BH7_005 | No text annotation | ||
| IL_8BH7_006 | Multiple bulged bases | ||
| IL_8BH7_007 | No text annotation | ||
| IL_8BH7_008 | tWH-tWH-tHW-tHW | ||
| IL_8BH7_009 | Isolated non-canonical cWW pair | ||
| IL_8BH7_010 | No text annotation | ||
| IL_8BH7_070 | No text annotation | ||
| IL_8BH7_011 | Kink-turn with non-sequential stacking | ||
| IL_8BH7_012 | No text annotation | ||
| IL_8BH7_013 | C-loop | ||
| IL_8BH7_014 | Single bulged U | ||
| IL_8BH7_015 | C-loop | ||
| IL_8BH7_016 | No text annotation | ||
| IL_8BH7_017 | No text annotation | ||
| IL_8BH7_018 | Isolated non-canonical cWW pair | ||
| IL_8BH7_071 | No text annotation | ||
| IL_8BH7_019 | SSU/LSU pseudoknot | ||
| IL_8BH7_020 | Kink-turn related | ||
| IL_8BH7_021 | No text annotation | ||
| IL_8BH7_022 | Isolated non-canonical cWW pair | ||
| IL_8BH7_023 | No text annotation | ||
| IL_8BH7_024 | No text annotation | ||
| IL_8BH7_072 | No text annotation | ||
| IL_8BH7_025 | Major groove platform | ||
| IL_8BH7_073 | Major groove minor groove platform; mini C-loop | ||
| IL_8BH7_026 | 8-nt loop receptor | ||
| IL_8BH7_027 | Isolated non-canonical cWW pair | ||
| IL_8BH7_028 | No text annotation | ||
| IL_8BH7_029 | No text annotation | ||
| IL_8BH7_030 | No text annotation | ||
| IL_8BH7_074 | No text annotation | ||
| IL_8BH7_031 | Tandem non-canonical cWW pairs | ||
| IL_8BH7_032 | Isolated non-canonical cWW pair | ||
| IL_8BH7_075 | Triple non-canonical cWW pairs | ||
| IL_8BH7_033 | No text annotation | ||
| IL_8BH7_034 | Isolated non-canonical cWW pair | ||
| IL_8BH7_035 | Kink-turn | ||
| IL_8BH7_036 | Other IL | ||
| IL_8BH7_037 | tSH-tWH-tHS | ||
| IL_8BH7_038 | Tandem non-canonical cWW pairs | ||
| IL_8BH7_039 | Isolated cWH basepair | ||
| IL_8BH7_076 | No text annotation | ||
| IL_8BH7_040 | Isolated cWS basepair | ||
| IL_8BH7_041 | Isolated non-canonical cWW pair | ||
| IL_8BH7_042 | No text annotation | ||
| IL_8BH7_043 | Tandem non-canonical cWW pairs | ||
| IL_8BH7_044 | No text annotation | ||
| IL_8BH7_084 | No text annotation | ||
| IL_8BH7_077 | No text annotation | ||
| IL_8BH7_045 | Multiple bulged bases | ||
| IL_8BH7_046 | No text annotation | ||
| IL_8BH7_047 | Minor groove platform | ||
| IL_8BH7_048 | Single bulged A | ||
| IL_8BH7_049 | Isolated non-canonical cWW pair | ||
| IL_8BH7_078 | No text annotation | ||
| IL_8BH7_050 | Single stack bend | ||
| IL_8BH7_051 | Isolated non-canonical cWW pair | ||
| IL_8BH7_052 | No text annotation | ||
| IL_8BH7_053 | Minor groove platform | ||
| IL_8BH7_079 | No text annotation | ||
| IL_8BH7_054 | Minor groove platform | ||
| IL_8BH7_055 | No text annotation | ||
| IL_8BH7_080 | No text annotation | ||
| IL_8BH7_085 | No text annotation | ||
| IL_8BH7_056 | 180 degree turn | ||
| IL_8BH7_057 | Double sheared with non-canonical cWW | ||
| IL_8BH7_058 | No text annotation | ||
| IL_8BH7_059 | Isolated non-canonical cWW pair | ||
| IL_8BH7_060 | No text annotation | ||
| IL_8BH7_061 | Tandem non-canonical cWW pairs | ||
| IL_8BH7_081 | No text annotation | ||
| IL_8BH7_062 | Isolated non-canonical cWW pair | ||
| IL_8BH7_082 | No text annotation | ||
| IL_8BH7_063 | No text annotation | ||
| IL_8BH7_064 | Isolated non-canonical cWW pair | ||
| IL_8BH7_065 | No text annotation | ||
| IL_8BH7_066 | No text annotation | ||
| IL_8BH7_067 | Isolated non-canonical cWW pair | ||
| IL_8BH7_068 | Isolated tHS basepair with bulges | ||
| IL_8BH7_069 | No text annotation | ||
| IL_8BH7_083 | No text annotation |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_8BH7_009 | No text annotation | ||
| J3_8BH7_010 | No text annotation | ||
| J3_8BH7_011 | No text annotation | ||
| J3_8BH7_012 | No text annotation | ||
| J3_8BH7_013 | No text annotation | ||
| J3_8BH7_001 | No text annotation | ||
| J3_8BH7_014 | No text annotation | ||
| J3_8BH7_002 | No text annotation | ||
| J3_8BH7_015 | No text annotation | ||
| J3_8BH7_003 | No text annotation | ||
| J3_8BH7_004 | No text annotation | ||
| J3_8BH7_016 | No text annotation | ||
| J3_8BH7_017 | No text annotation | ||
| J3_8BH7_005 | No text annotation | ||
| J3_8BH7_006 | No text annotation | ||
| J3_8BH7_007 | No text annotation | ||
| J3_8BH7_018 | No text annotation | ||
| J3_8BH7_008 | No text annotation | ||
| J4_8BH7_001 | No text annotation | ||
| J4_8BH7_002 | No text annotation | ||
| J4_8BH7_005 | No text annotation | ||
| J4_8BH7_003 | No text annotation | ||
| J4_8BH7_006 | No text annotation | ||
| J4_8BH7_004 | No text annotation | ||
| J5_8BH7_003 | No text annotation | ||
| J5_8BH7_001 | No text annotation | ||
| J5_8BH7_002 | No text annotation |
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