J3_8BH7_016

3D structure

PDB id

8BH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

4.23 Å

Loop

Sequence

CUUGACAU*ACAGGUGG*CCCUUAUG

Length

24 nucleotides

Bulged bases

8BH7|1|a|C|1005, 8BH7|1|a|U|1061, 8BH7|1|a|U|1225

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BH7|1|a|C|1000
8BH7|1|a|U|1001
8BH7|1|a|U|1002
8BH7|1|a|G|1003
8BH7|1|a|A|1004
8BH7|1|a|C|1005
8BH7|1|a|A|1006
8BH7|1|a|U|1007
*
8BH7|1|a|A|1056
8BH7|1|a|C|1057
8BH7|1|a|A|1058
8BH7|1|a|G|1059
8BH7|1|a|G|1060
8BH7|1|a|U|1061
8BH7|1|a|G|1062
8BH7|1|a|G|1063
*
8BH7|1|a|C|1219
8BH7|1|a|C|1220
8BH7|1|a|C|1221
8BH7|1|a|U|1222
8BH7|1|a|U|1223
8BH7|1|a|A|1224
8BH7|1|a|U|1225
8BH7|1|a|G|1226

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14 type Z