J3_8BHF_022
3D structure
- PDB id
- 8BHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 8BHF|1|A3|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BHF|1|A3|C|1391
8BHF|1|A3|U|1392
8BHF|1|A3|G|1393
8BHF|1|A3|G|1394
8BHF|1|A3|C|1395
*
8BHF|1|A3|G|1450
8BHF|1|A3|G|1451
8BHF|1|A3|A|1452
8BHF|1|A3|C|1453
8BHF|1|A3|A|1454
8BHF|1|A3|A|1455
8BHF|1|A3|G|1456
*
8BHF|1|A3|C|1470
8BHF|1|A3|C|1471
8BHF|1|A3|C|1472
8BHF|1|A3|G|1473
8BHF|1|A3|A|1474
8BHF|1|A3|G|1475
8BHF|1|A3|A|1476
8BHF|1|A3|U|1477
8BHF|1|A3|U|1478
8BHF|1|A3|G|1479
Current chains
- Chain A3
- 18S ribosomal RNA
Nearby chains
- Chain E3
- Ribosomal protein S3
- Chain G3
- Ribosomal protein S5
- Chain R3
- Ribosomal protein S16
- Chain S3
- 40S ribosomal protein S17
- Chain V3
- Ribosomal protein S20
- Chain d3
- Ribosomal protein S28
- Chain e3
- 40S ribosomal protein S29
- Chain h3
- Ribosomal protein RACK1
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