J3_8BHF_039
3D structure
- PDB id
- 8BHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGGA*UUAAGA*UA
- Length
- 12 nucleotides
- Bulged bases
- 8BHF|1|A3|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BHF|1|A3|U|682
8BHF|1|A3|G|683
8BHF|1|A3|G|684
8BHF|1|A3|A|685
*
8BHF|1|A3|U|917
8BHF|1|A3|U|918
8BHF|1|A3|A|919
8BHF|1|A3|A|920
8BHF|1|A3|G|921
8BHF|1|A3|A|922
*
8BHF|1|A3|U|1022
8BHF|1|A3|A|1023
Current chains
- Chain A3
- 18S ribosomal RNA
Nearby chains
- Chain I3
- 40S ribosomal protein S7
- Chain M3
- 40S ribosomal protein S11
- Chain O3
- ribosomal protein uS15
- Chain X3
- Ribosomal protein S15a
- Chain Y3
- Ribosomal protein S23
- Chain c3
- 40S ribosomal protein S27
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