J3_8BIL_001

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8BIL|1|0|U|686, 8BIL|1|0|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8BIL_001 not in the Motif Atlas

Homologous match to J3_7RQB_004

Geometric discrepancy: 0.347

The information below is about J3_7RQB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_39238.4

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

8BIL|1|0|U|683
8BIL|1|0|G|684
8BIL|1|0|A|685
8BIL|1|0|U|686
8BIL|1|0|C|687
8BIL|1|0|U|688
8BIL|1|0|A|689
*
8BIL|1|0|U|773
8BIL|1|0|G|774
8BIL|1|0|G|775
*
8BIL|1|0|C|791
8BIL|1|0|A|792
8BIL|1|0|A|793
8BIL|1|0|A|794

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain A

50S ribosomal protein L2

Chain c

50S ribosomal protein L34