J3_8BR8_007

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GACG*CGAC*GAC

Length

11 nucleotides

Bulged bases

8BR8|1|Lt|G|1473

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|G|1172
8BR8|1|Lt|A|1173
8BR8|1|Lt|C|1174
8BR8|1|Lt|G|1175
*
8BR8|1|Lt|C|1472
8BR8|1|Lt|G|1473
8BR8|1|Lt|A|1474
8BR8|1|Lt|C|1475
*
8BR8|1|Lt|G|1484
8BR8|1|Lt|A|1485
8BR8|1|Lt|C|1486

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LG

Ribosomal protein L39

Chain Lh

Ribosomal protein L34

Chain Lk

Ribosomal protein L37