J3_8BR8_014

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CCC*GGCG*CAGAGCG

Length

14 nucleotides

Bulged bases

8BR8|1|Lt|C|2687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|C|2611
8BR8|1|Lt|C|2612
8BR8|1|Lt|C|2613
*
8BR8|1|Lt|G|2627
8BR8|1|Lt|G|2628
8BR8|1|Lt|C|2629
8BR8|1|Lt|G|2630
*
8BR8|1|Lt|C|2682
8BR8|1|Lt|A|2683
8BR8|1|Lt|G|2684
8BR8|1|Lt|A|2685
8BR8|1|Lt|G|2686
8BR8|1|Lt|C|2687
8BR8|1|Lt|G|2688

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LB

Ribosomal protein L3

Chain LQ

Ribosomal protein L17

Chain Le

Ribosomal protein L31B