J3_8BR8_016

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

UAGCC*GUGCG*CGA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|St|U|122
8BR8|1|St|A|123
8BR8|1|St|G|124
8BR8|1|St|C|125
8BR8|1|St|C|126
*
8BR8|1|St|G|156
8BR8|1|St|U|157
8BR8|1|St|G|158
8BR8|1|St|C|159
8BR8|1|St|G|160
*
8BR8|1|St|C|201
8BR8|1|St|G|202
8BR8|1|St|A|203

Current chains

Chain St

Small Subunit rRNA

Nearby chains

Chain SG

40S ribosomal protein S6