J3_8BR8_031

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CGCGAGGG*CCGCCCGAGAG*CGUACG

Length

25 nucleotides

Bulged bases

8BR8|1|Lt|G|177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|C|151
8BR8|1|Lt|G|152
8BR8|1|Lt|C|153
8BR8|1|Lt|G|154
8BR8|1|Lt|A|155
8BR8|1|Lt|G|156
8BR8|1|Lt|G|157
8BR8|1|Lt|G|158
*
8BR8|1|Lt|C|171
8BR8|1|Lt|C|172
8BR8|1|Lt|G|173
8BR8|1|Lt|C|174
8BR8|1|Lt|C|175
8BR8|1|Lt|C|176
8BR8|1|Lt|G|177
8BR8|1|Lt|A|178
8BR8|1|Lt|G|179
8BR8|1|Lt|A|180
8BR8|1|Lt|G|181
*
8BR8|1|Lt|C|193
8BR8|1|Lt|G|194
8BR8|1|Lt|U|195
8BR8|1|Lt|A|196
8BR8|1|Lt|C|197
8BR8|1|Lt|G|198

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LC

Ribosomal protein L4

Chain LD

5.8S rRNA

Chain LZ

Ribosomal protein L26