J3_8BUU_007
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAAG*CGCAAAC*GUAG
- Length
- 16 nucleotides
- Bulged bases
- 8BUU|1|A|A|1654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BUU_007 not in the Motif Atlas
- Homologous match to J3_4WF9_005
- Geometric discrepancy: 0.1322
- The information below is about J3_4WF9_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_68164.1
- Basepair signature
- cWW-tSH-F-F-tHW-F-F-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
8BUU|1|A|C|1344
8BUU|1|A|U|1345
8BUU|1|A|A|1346
8BUU|1|A|A|1347
8BUU|1|A|G|1348
*
8BUU|1|A|C|1650
8BUU|1|A|G|1651
8BUU|1|A|C|1652
8BUU|1|A|A|1653
8BUU|1|A|A|1654
8BUU|1|A|A|1655
8BUU|1|A|C|1656
*
8BUU|1|A|G|1665
8BUU|1|A|U|1666
8BUU|1|A|A|1667
8BUU|1|A|G|1668
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: