J3_8BUU_011
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8BUU|1|A|A|2547, 8BUU|1|A|U|2548
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BUU_011 not in the Motif Atlas
- Homologous match to J3_4WF9_009
- Geometric discrepancy: 0.0725
- The information below is about J3_4WF9_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.6
- Basepair signature
- cWW-cWH-cWW-tWH-tSS-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8BUU|1|A|C|2546
8BUU|1|A|A|2547
8BUU|1|A|U|2548
8BUU|1|A|C|2549
*
8BUU|1|A|G|2574
8BUU|1|A|U|2575
8BUU|1|A|U|2576
*
8BUU|1|A|A|2590
8BUU|1|A|U|2591
8BUU|1|A|U|2592
8BUU|1|A|A|2593
8BUU|1|A|A|2594
8BUU|1|A|A|2595
8BUU|1|A|G|2596
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
Coloring options: