J3_8BUU_025
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BUU_025 not in the Motif Atlas
- Homologous match to J3_5J7L_009
- Geometric discrepancy: 0.0941
- The information below is about J3_5J7L_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76043.3
- Basepair signature
- cWW-cWW-tSS-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
8BUU|1|a|U|1083
8BUU|1|a|G|1084
*
8BUU|1|a|U|1093
8BUU|1|a|G|1094
8BUU|1|a|U|1095
8BUU|1|a|U|1096
8BUU|1|a|G|1097
*
8BUU|1|a|C|1108
8BUU|1|a|G|1109
8BUU|1|a|C|1110
8BUU|1|a|A|1111
8BUU|1|a|A|1112
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain e
- 30S ribosomal protein S5
Coloring options: