J3_8BUU_030
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAG*CGCCAUAGGA*UGUAG
- Length
- 20 nucleotides
- Bulged bases
- 8BUU|1|A|U|365
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BUU_030 not in the Motif Atlas
- Homologous match to J3_4WF9_015
- Geometric discrepancy: 0.1049
- The information below is about J3_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_77124.1
- Basepair signature
- cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8BUU|1|A|U|340
8BUU|1|A|G|341
8BUU|1|A|A|342
8BUU|1|A|A|343
8BUU|1|A|G|344
*
8BUU|1|A|C|360
8BUU|1|A|G|361
8BUU|1|A|C|362
8BUU|1|A|C|363
8BUU|1|A|A|364
8BUU|1|A|U|365
8BUU|1|A|A|366
8BUU|1|A|G|367
8BUU|1|A|G|368
8BUU|1|A|A|369
*
8BUU|1|A|U|381
8BUU|1|A|G|382
8BUU|1|A|U|383
8BUU|1|A|A|384
8BUU|1|A|G|385
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain U
- 50S ribosomal protein L24
Coloring options: