J3_8CAM_005

3D structure

PDB id

8CAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evernimicin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.86 Å

Loop

Sequence

CU(2MG)C*GCGUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

8CAM|1|a|U|1971

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CAM|1|a|C|1833
8CAM|1|a|U|1834
8CAM|1|a|2MG|1835
8CAM|1|a|C|1836
*
8CAM|1|a|G|1904
8CAM|1|a|C|1905
8CAM|1|a|G|1906
8CAM|1|a|U|1926
8CAM|1|a|A|1927
8CAM|1|a|A|1928
8CAM|1|a|G|1929
8CAM|1|a|G|1930
8CAM|1|a|U|1931
8CAM|1|a|A|1932
8CAM|1|a|G|1933
*
8CAM|1|a|C|1967
8CAM|1|a|G|1968
8CAM|1|a|A|1969
8CAM|1|a|A|1970
8CAM|1|a|U|1971
8CAM|1|a|G|1972

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2