J3_8CMJ_035
3D structure
- PDB id
- 8CMJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.79 Å
Loop
- Sequence
- CUC*GAAC*GUAAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8CMJ|1|AA|A|2703, 8CMJ|1|AA|A|2705
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CMJ|1|AA|C|2664
8CMJ|1|AA|U|2665
8CMJ|1|AA|C|2666
*
8CMJ|1|AA|G|2690
8CMJ|1|AA|A|2691
8CMJ|1|AA|A|2692
8CMJ|1|AA|C|2693
*
8CMJ|1|AA|G|2700
8CMJ|1|AA|U|2701
8CMJ|1|AA|A|2702
8CMJ|1|AA|A|2703
8CMJ|1|AA|A|2704
8CMJ|1|AA|A|2705
8CMJ|1|AA|G|2706
Current chains
- Chain AA
- 25S ribosomal RNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 60S ribosomal protein L21-A
- Chain HH
- 60S ribosomal protein L5
- Chain NN
- 60S ribosomal protein L11-A
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